Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SETD3Histone-lysine N-methyltransferase setd3 isoform X1. (594 aa)    
Predicted Functional Partners:
NSD3
Histone-lysine N-methyltransferase NSD3 isoform X1.
     
 0.711
BCCIP
BRCA2 and CDKN1A-interacting protein isoform X1.
   
 
 0.705
LOC110077694
[histone H3]-lysine36 N-dimethyltransferase SETMAR.
     
 0.663
NMD3
Nonsense-mediated mRNA decay protein 3.
   
  
 0.662
NAA80
N-acetyltransferase 6 isoform X1.
      
 0.633
ASH1L
[histone H3]-lysine4 N-trimethyltransferase ASH1L.
     
 0.630
SMYD2
[histone H3]-lysine4/36 N-trimethyltransferase SMYD.
   
 
 0.605
SLC25A16
Solute carrier family 25 (mitochondrial carrier protein), member 16.
      
 0.591
COG1
Conserved oligomeric Golgi complex subunit 1.
   
  
 0.588
MINDY2
Ubiquitin carboxyl-terminal hydrolase MINDY-2 isoform X1.
    
 0.585
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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