Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF1DElongation factor 1-delta isoform X1. (780 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 0.997
EEF1B2
Elongation factor 1-beta.
  
0.996
VARS1
Valyl-tRNA synthetase.
   
 0.948
RPL14
Large subunit ribosomal protein L14e.
   
 
 0.931
RPL18
Large subunit ribosomal protein L18e.
   
 
 0.931
TPT1
Translationally-controlled tumor protein.
   
 
 0.912
RPS7
40S ribosomal protein S7 isoform X1.
   
 
 0.897
RPS3
Small subunit ribosomal protein S3e.
  
 
 0.896
RPLP0
Large subunit ribosomal protein LP0.
  
 
 0.889
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
   
 
 0.886
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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