Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000003987annotation not available (180 aa)    
Predicted Functional Partners:
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.908
PAGR1
PAXIP1-associated glutamate-rich protein 1 isoform X1.
    
 0.905
PAXIP1
PAX-interacting protein 1.
 
      0.899
TP53BP1
Tumor suppressor p53-binding protein 1.
   
 0.896
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.879
NCOA6
Nuclear receptor coactivator 6.
   
 0.865
RNF8
E3 ubiquitin-protein ligase RNF8 isoform X1.
    
 0.855
BRCA1
Breast cancer type 1 susceptibility protein.
   
 0.853
NBN
Nibrin isoform X1.
    
 0.847
UIMC1
BRCA1-A complex subunit RAP80 isoform X1.
    
 0.845
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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