STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000003987annotation not available (180 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
    
 0.961
KDM6A
Lysine-specific demethylase 6A isoform X1.
    
 0.961
PAXIP1
PAX-interacting protein 1.
 
      0.899
TP53BP1
Tumor suppressor p53-binding protein 1.
    
 0.884
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.853
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
   
 0.843
SLF1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
   
 0.830
SMC6
Structural maintenance of chromosomes protein 6 isoform X1.
   
 
 0.813
NBN
Nibrin isoform X1.
    
 0.812
NCOA6
Nuclear receptor coactivator 6.
    
 0.804
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.