STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070158Ubiquitin carboxyl-terminal hydrolase CYLD-like. (790 aa)    
Predicted Functional Partners:
RIPK1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.983
IKBKE
Inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1.
   
 0.959
SPATA2
Spermatogenesis-associated protein 2.
     
 0.958
LOC110076953
Tumor necrosis factor receptor superfamily member 1A-like isoform X1.
    
 0.944
DDX58
Probable ATP-dependent RNA helicase DDX58 isoform X1.
    
 0.929
SPATA2L
Spermatogenesis-associated protein 2-like protein.
    
 0.911
LSP1
Lymphocyte-specific protein 1 isoform X1.
     
 0.907
LOC110091688
Ubiquitin carboxyl-terminal hydrolase CYLD-like.
  
  
 
0.906
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform X1.
  
  
 
0.904
RPS27A
Ribosomal protein S27a.
   
  0.898
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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