STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHLRC3NHL repeat containing 3. (418 aa)    
Predicted Functional Partners:
PROSER1
Proline and serine-rich protein 1 isoform X1.
    
 0.895
DOK4
Docking protein 4.
      
 0.696
IGSF21
Immunoglobulin superfamily member 21 isoform X1.
    
 0.579
FREM3
FRAS1-related extracellular matrix protein 3.
    
 0.575
LHFPL6
LHFPL tetraspan subfamily member protein.
      
 0.574
ENSPVIP00000023050
annotation not available
      
 0.568
ARHGAP19
Rho GTPase-activating protein 19.
     
 0.482
NDFIP2
NEDD4 family-interacting protein 2 isoform X1.
      
 0.476
ATG16L2
Autophagy-related protein 16-2.
      
 0.452
ARID5A
AT-rich interaction domain 5A.
    
 
 0.442
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.