STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFSWAPSplicing factor, suppressor of white-apricot homolog. (889 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain-containing family member B isoform X1.
      
 0.894
CFAP20
Cilia- and flagella-associated protein 20.
    
   0.862
SF3A3
Splicing factor 3a subunit 3.
      
 0.675
SF3A2
Splicing factor 3A subunit 2.
      
 0.659
FBXL5
F-box and leucine-rich repeat protein 5.
      
 0.648
RBM17
Splicing factor 45 isoform X1.
    
   0.637
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
  
 0.613
SRRM1
Serine/arginine repetitive matrix protein 1 isoform X1.
   
 
 0.599
NCMAP
Noncompact myelin-associated protein isoform X1.
   
 
 0.594
UHMK1
Serine/threonine-protein kinase Kist.
      
 0.566
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.