STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA24Spermatogenesis-associated protein 24. (211 aa)    
Predicted Functional Partners:
ENSPVIP00000006312
annotation not available
      
 0.567
NME8
Thioredoxin domain-containing protein 3.
      
 0.567
ENSPVIP00000006316
annotation not available
      
 0.567
PKD2L2
Polycystic kidney disease 2-like 2 protein isoform X1.
      
 0.558
ENSPVIP00000015070
Natural cytotoxicity triggering receptor 3 ligand 1.
      
 0.558
SMNDC1
Survival of motor neuron-related-splicing factor 30.
      
 0.557
FAM13B
Protein FAM13B isoform X1.
      
 0.550
U2AF1
Splicing factor U2AF 35 kDa subunit isoform X1.
      
 0.520
DNAJC18
DnaJ homolog subfamily C member 18 isoform X1.
      
 0.474
TDRD3
Tudor domain-containing protein 3.
      
 0.433
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.