STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD8Uncharacterized protein KIAA1107 homolog isoform X1. (1788 aa)    
Predicted Functional Partners:
EPHX1
Microsomal epoxide hydrolase.
   
  
 0.593
PTRH2
Peptidyl-tRNA hydrolase 2, mitochondrial isoform X1.
      
 0.561
TRAPPC6B
Trafficking protein particle complex subunit 6B.
      
 0.559
SETD5
SET domain-containing protein 5 isoform X1.
      
 0.558
EPHX4
Epoxide hydrolase 4.
 
      0.508
LRRC40
Leucine-rich repeat-containing protein 40.
    
 0.497
ENSPVIP00000011407
annotation not available
  
 0.484
NDUFAB1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
  
 0.484
PALB2
Partner and localizer of BRCA2 isoform X1.
  
 0.484
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
   
  
 0.478
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.