STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCMF1E3 ubiquitin-protein ligase KCMF1 isoform X1. (381 aa)    
Predicted Functional Partners:
UBR4
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4.
    
 
 0.960
ANKRD9
Ankyrin repeat domain-containing protein 9.
    
 
 0.863
SARS2
seryl-tRNA synthetase 2, mitochondrial.
    
   0.833
LOC110079017
Mycophenolic acid acyl-glucuronide esterase, mitochondrial-like.
    
   0.780
ABHD10
Mycophenolic acid acyl-glucuronide esterase, mitochondrial.
    
   0.780
FBXO11
F-box only protein 11 isoform X1.
      
 0.695
SH3RF2
Putative E3 ubiquitin-protein ligase SH3RF2.
      
 0.694
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
      
 0.673
ISCU
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial.
      
 0.658
THSD7A
Thrombospondin type-1 domain-containing protein 7A isoform X1.
      
 0.635
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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