Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOOK3Protein Hook homolog 3 isoform X1. (780 aa)    
Predicted Functional Partners:
AKTIP
AKT-interacting protein isoform X1.
   
 
 0.962
DYNC1LI1
Cytoplasmic dynein 1 light intermediate chain 1.
    
 0.893
FAM160A1
Protein FAM160A1.
    
 
 0.888
FAM160A2
Family with sequence similarity 160 member A2.
    
 
 0.888
DCTN1
Dynactin subunit 1.
    
 
 0.885
MCM4
DNA replication licensing factor MCM4.
   
 
 0.880
LOC110078657
Protein bicaudal D homolog 2-like isoform X1.
   
 
 0.816
BICD2
Protein bicaudal D homolog 2 isoform X1.
   
 
 0.810
BICD1
Protein bicaudal D homolog 1 isoform X1.
   
 
 0.810
DYNC1H1
Cytoplasmic dynein 1 heavy chain 1 isoform X1.
   
 
 0.768
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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