STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOOK3Protein Hook homolog 3 isoform X1. (780 aa)    
Predicted Functional Partners:
AKTIP
AKT-interacting protein isoform X1.
   
 0.976
HOOK2
Hook microtubule tethering protein 2.
  
 
0.931
DYNC1LI1
Cytoplasmic dynein 1 light intermediate chain 1.
    
 0.927
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 0.898
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
   
  0.896
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
   
 
  0.886
FAM160A1
Protein FAM160A1.
    
 0.850
FAM160A2
Family with sequence similarity 160 member A2.
    
 0.850
HOOK1
Protein Hook homolog 1 isoform X1.
  
  
 
0.767
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.698
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.