STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATR3Matrin-3 isoform X1. (883 aa)    
Predicted Functional Partners:
TARDBP
TAR DNA-binding protein 43 isoform X1.
   
 0.709
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 
 0.659
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.659
BCLAF1
Bcl-2-associated transcription factor 1 isoform X1.
  
 0.604
SIL1
Nucleotide exchange factor SIL1.
    
 
 0.601
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.596
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 0.584
PTBP2
Polypyrimidine tract-binding protein 2 isoform X1.
   
 
0.570
ILF2
Interleukin enhancer-binding factor 2.
   
 
 0.516
ENSPVIP00000015452
annotation not available
   
 0.511
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.