STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIL1Nucleotide exchange factor SIL1. (467 aa)    
Predicted Functional Partners:
HYOU1
Hypoxia up-regulated protein 1-like isoform X1.
   
 0.990
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 
 0.977
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.912
RPL5
Large subunit ribosomal protein L5e.
  
 0.872
RPL23A
Large subunit ribosomal protein L23Ae.
  
 0.872
RPL11
60S ribosomal protein L11 isoform X1.
  
 0.870
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.855
ENSPVIP00000028682
annotation not available
  
 0.852
DNAJB9
DnaJ homolog subfamily B member 9 isoform X1.
   
 
 0.848
MRPL9
39S ribosomal protein L9, mitochondrial.
  
 0.843
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.