STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH6DNA mismatch repair protein Msh6 isoform X1. (1322 aa)    
Predicted Functional Partners:
MSH2
DNA mismatch repair protein MSH2.
  
0.988
PCNA
Proliferating cell nuclear antigen isoform X1.
   
 0.979
MLH1
DNA mismatch repair protein MLH1.
 
 0.972
MSH3
DNA mismatch repair protein MSH3.
  
 
0.968
PMS2
Mismatch repair endonuclease PMS2.
  
 0.963
PMS1
PMS1 protein homolog 1 isoform X1.
 
 0.959
POLD1
DNA polymerase delta catalytic subunit.
   
 0.941
EXO1
Exonuclease 1 isoform X1.
   
 0.933
ENSPVIP00000020409
annotation not available
   
 0.897
FANCM
Fanconi anemia group M protein.
   
 0.897
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.