Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPAP2Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1. (625 aa)    
Predicted Functional Partners:
GPN3
GPN-loop GTPase 3.
    
 
 0.991
RPRD1B
Regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1.
   
 0.988
RPRD1A
Regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1.
   
 0.987
POLR2E
RNA polymerase II subunit E.
    
 0.986
GPN1
GPN-loop GTPase 1.
    
 
 0.982
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 0.980
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.980
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.974
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
    
 0.973
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.969
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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