STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSH2DNA mismatch repair protein MSH2. (1024 aa)    
Predicted Functional Partners:
MLH1
DNA mismatch repair protein MLH1.
 
 0.999
PMS2
Mismatch repair endonuclease PMS2.
 
 0.998
MSH3
DNA mismatch repair protein MSH3.
  
0.998
MSH6
DNA mismatch repair protein Msh6 isoform X1.
  
0.997
PMS1
PMS1 protein homolog 1 isoform X1.
 
 0.995
ENSPVIP00000024186
annotation not available
  
0.995
EXO1
Exonuclease 1 isoform X1.
   
 0.993
PCNA
Proliferating cell nuclear antigen isoform X1.
   
 0.980
BRCA1
Breast cancer type 1 susceptibility protein.
   
 0.965
TP53
Cellular tumor antigen p53.
    
 0.963
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.