STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFI1Zinc finger protein Gfi-1 isoform X1. (353 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.823
RCOR1
REST corepressor 1.
    
 0.758
GATA1
GATA binding protein 1.
   
 0.579
TAL1
T-cell acute lymphocytic leukemia protein 1 isoform X1.
   
 0.543
MYB
Transcriptional activator Myb isoform X1.
   
 0.478
RCOR3
REST corepressor 3 isoform X1.
    
 0.466
RCOR2
REST corepressor 2.
    
 0.466
DR1
Down-regulator of transcription 1.
    
 
 0.454
AR
Androgen receptor-like.
    
 0.452
LMO2
LIM domain only 2.
    
 
 0.450
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.