STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPCAMEpithelial cell adhesion molecule. (310 aa)    
Predicted Functional Partners:
CXADR
Coxsackievirus and adenovirus receptor isoform X1.
      
 0.726
KRT8
Keratin, type II cytoskeletal 8 isoform X1.
   
  
 0.626
PLS1
Plastin-1.
      
 0.564
PLS3
Plastin-3 isoform X1.
      
 0.564
SUSD2
Sushi domain-containing protein 2.
      
 0.563
CDX4
Homeobox protein CDX-4 isoform X1.
      
 0.535
CDX2
Caudal type homeobox 2.
      
 0.535
ENSPVIP00000011194
annotation not available
      
 0.479
NECTIN4
Poliovirus receptor-related 4.
      
 0.479
CLDN10
Claudin 10.
   
 
 0.469
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.