STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM2Leucine-rich repeat transmembrane neuronal protein 1/2. (504 aa)    
Predicted Functional Partners:
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4.
      
 0.680
ZC2HC1B
Zinc finger C2HC domain-containing protein 1B.
      
 0.650
NRXN3-2
Neurexin 3.
    
 0.624
NRXN3
Neurexin 3 isoform X1.
    
 0.624
ENSPVIP00000001000
annotation not available
    
 0.624
LOC110089209
Neurexin-1-like.
    
 0.624
NRXN2
Neurexin-2.
    
 0.624
TMEM38B
Trimeric intracellular cation channel type B.
    
   0.616
ZDHHC22
Palmitoyltransferase ZDHHC22.
   
  
 0.608
LOC110088663
Neurexin-1-beta isoform X1.
    
 0.603
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.