STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB38Ras-related protein Rab-38. (182 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.722
ANKRD27
Ankyrin repeat domain-containing protein 27 isoform X1.
    
 
 0.710
GAK
Cyclin-G-associated kinase isoform X1.
    
 
 0.703
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.689
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.689
ENSPVIP00000023526
annotation not available
    
 0.626
TYRP1
Tyrosinase related protein 1.
      
 0.621
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.530
GDI1
Rab GDP dissociation inhibitor alpha.
    
 0.530
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.512
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.