Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
COA7Cytochrome c oxidase assembly factor 7 isoform X1. (240 aa)    
Predicted Functional Partners:
MGME1
Mitochondrial genome maintenance exonuclease 1.
      
 0.695
CHCHD4
Mitochondrial intermembrane space import and assembly protein 40.
   
 
 0.681
TACO1
Translational activator of cytochrome c oxidase 1.
     
 0.655
CRHBP
Corticotropin-releasing factor-binding protein isoform X1.
    
   0.625
ATP23
Mitochondrial inner membrane protease ATP23 homolog isoform X1.
      
 0.621
SCAF4
Splicing factor, arginine/serine-rich 15 isoform X1.
    
   0.616
VMA21
Vacuolar ATPase assembly integral membrane protein VMA21.
    
   0.616
DERL1
Derlin-1.
   
 0.591
MPHOSPH6
M-phase phosphoprotein 6, animal type.
    
   0.585
C1D
Nuclear nucleic acid-binding protein C1D.
    
   0.585
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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