STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004212annotation not available (138 aa)    
Predicted Functional Partners:
RAB27B
Ras-related protein Rab-27B.
    
 0.817
RAB27A
Ras-related protein Rab-27A.
    
 0.817
SYTL1
Synaptotagmin-like protein 1 isoform X1.
     
 0.780
BICC1
Protein bicaudal C homolog 1.
      
 0.764
MYRIP
Rab effector MyRIP.
 
      0.726
WFS1
Wolframin.
      
 0.655
LOC110074318
Synaptotagmin-like protein 4.
     
 0.595
SYTL2
Synaptotagmin-like protein 2 isoform X1.
     
 0.595
MYO5B
Myosin VB.
     
 0.588
MYO5C
Unconventional myosin-Vc isoform X1.
     
 0.588
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.