Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004220annotation not available (108 aa)    
Predicted Functional Partners:
COL27A1
Collagen type V/XI/XXIV/XXVII, alpha.
 
      0.896
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 0.516
COL24A1
Collagen type V/XI/XXIV/XXVII, alpha.
 
      0.455
COL6A2
Collagen alpha-2(VI) chain isoform X1.
   
 0.435
COL8A1
Collagen alpha-1(VIII) chain.
 
   
 0.432
CRTAP
Cartilage-associated protein.
    
 0.430
P3H4
Synaptonemal complex protein SC65 isoform X1.
    
 0.430
ENSPVIP00000002638
annotation not available
    
 0.415
PDIA2
Protein disulfide-isomerase A2.
    
  0.411
P4HB
Protein disulfide-isomerase A1.
    
  0.411
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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