Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyltransferase 4. (1618 aa)    
Predicted Functional Partners:
LIN28A
Protein lin-28 homolog A.
    
 0.940
TUT7
Terminal uridylyltransferase 7.
   
 0.934
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.794
DIS3L2
DIS3-like exonuclease 2.
   
 
 0.745
PAPOLA
Poly(A) polymerase alpha isoform X1.
   
 
 0.708
LIN28B
Protein lin-28 homolog B isoform X1.
    
 0.664
ANO8
Anoctamin-8.
      
 0.604
CXorf38
Chromosome unknown CXorf38 homolog.
     
 0.576
TENT4B
Non-canonical poly(A) RNA polymerase PAPD5/7.
   
  
 0.568
CCDC24
Coiled-coil domain-containing protein 24 isoform X1.
      
 0.564
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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