STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XYLBXylulose kinase isoform X1. (531 aa)    
Predicted Functional Partners:
RPE
Ribulose-phosphate 3-epimerase isoform X1.
   
 0.968
SORD
L-iditol 2-dehydrogenase.
  
 
 0.930
CRYZL1
Quinone oxidoreductase-like protein 1 isoform X1.
  
  
 0.863
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 
 0.863
TKT
Transketolase.
  
 
 0.809
TKTL2
Transketolase-like protein 1.
  
 
 0.809
AGL
Glycogen debranching enzyme isoform X1.
  
   0.792
TALDO1
Transaldolase.
  
 
 0.740
APIP
Methylthioribulose-1-phosphate dehydratase.
  
 
 0.727
ADD1
Alpha-adducin isoform X1.
  
 
 0.727
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.