close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO1Rhombotin-1 isoform X1. (156 aa)    
Predicted Functional Partners:
LDB1
LIM domain-binding protein 1 isoform X1.
    
 0.839
LDB2
LIM domain-binding protein 2 isoform X1.
    
 0.839
TAL1
T-cell acute lymphocytic leukemia protein 1 isoform X1.
    
 0.754
TCF12
Transcription factor 12 isoform X1.
    
 0.631
GATA1
GATA binding protein 1.
    
 0.567
CBFB
Core-binding factor subunit beta.
    
  0.562
RUNX1
Runt-related transcription factor 1 isoform X1.
     
 0.557
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.555
GATA2
Endothelial transcription factor GATA-2 isoform X1.
    
 0.545
ENSPVIP00000007234
annotation not available
    
 0.498
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.