STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PITRM1LOW QUALITY PROTEIN: presequence protease, mitochondrial-like. (854 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.885
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial isoform X1.
   
 
 0.843
PDHB
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
    
   0.839
SUCLG2
Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X1.
  
   0.776
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1.
     
 0.776
GRPEL1
GrpE protein homolog 1, mitochondrial.
   
 
 0.775
HSPD1
60 kDa heat shock protein, mitochondrial.
   
 0.744
DLD
Dihydrolipoyl dehydrogenase, mitochondrial.
   
 
 0.737
XPNPEP2
X-prolyl aminopeptidase 2.
   
 
 0.719
XPNPEP1
Xaa-Pro aminopeptidase 1 isoform X1.
   
 
 0.719
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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