STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUBTubby protein homolog isoform X1. (567 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport protein 140 homolog isoform X1.
    
 0.862
TTC21B
Tetratricopeptide repeat protein 21B.
    
 0.840
IFT122
Intraflagellar transport 122.
    
 0.824
WDR19
WD repeat-containing protein 19 isoform X1.
    
 0.811
WDR35
WD repeat-containing protein 35 isoform X1.
    
 0.776
GPR161
G-protein coupled receptor 161 isoform X1.
    
 0.683
IFT43
Intraflagellar transport protein 43 homolog isoform X1.
    
 
 0.679
ANKRD54
Ankyrin repeat domain-containing protein 54.
    
   0.604
TTC21A
Tetratricopeptide repeat protein 21A isoform X1.
    
 0.597
MPL
Thrombopoietin receptor.
      
 0.592
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.