STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPB1Coatomer subunit beta isoform X1. (953 aa)    
Predicted Functional Partners:
ARCN1
Coatomer subunit delta.
   
 0.999
COPA
Coatomer protein complex subunit alpha.
   
 0.999
COPB2
Coatomer subunit beta.
   
 0.999
COPE
Coatomer subunit epsilon.
   
 0.997
COPZ2
Coatomer subunit zeta-2 isoform X1.
   
 0.991
PRR15L
Proline-rich protein 15-like protein isoform X1.
   
 0.971
ARFGAP2
ADP-ribosylation factor GTPase-activating protein 2 isoform X1.
    
 0.951
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.951
ENSPVIP00000000385
annotation not available
   
 0.946
COPG1
Coatomer subunit gamma-1 isoform X1.
   
 0.946
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.