STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha-1 isoform X1. (2852 aa)    
Predicted Functional Partners:
LAMA2
Laminin subunit alpha-2.
  
 
0.925
CD44
CD44 antigen isoform X1.
     
 0.904
ITGA1
Integrin alpha 1.
    
 0.804
ITGB4
Integrin subunit beta 4.
    
 0.777
ITGA3
Integrin alpha-3 isoform X1.
    
 0.775
ITGA4
Integrin subunit alpha 4.
    
 0.755
ITGA6
Integrin alpha-6 isoform X1.
    
 0.755
ITGA7
Integrin subunit alpha 7.
    
 0.755
ITGA11
Integrin alpha 11.
    
 0.745
ITGA2
Integrin alpha 2.
    
 0.745
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.