STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha-1 isoform X1. (2852 aa)    
Predicted Functional Partners:
ITGA1
Integrin alpha 1.
    
 0.929
ITGA3
Integrin alpha-3 isoform X1.
    
 0.924
ITGA6
Integrin alpha-6 isoform X1.
    
 0.922
ITGB8
Integrin beta-8 isoform X1.
    
 0.918
ITGB1
Integrin beta-1 isoform X1.
    
 0.918
ITGAV
Integrin alpha V.
    
 0.918
ITGA2
Integrin alpha 2.
    
 0.917
DAG1
Dystroglycan 1.
    
 0.917
ITGA9
Integrin alpha 9.
    
 0.916
CD44
CD44 antigen isoform X1.
     
 0.912
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.