STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC30Leucine-rich repeat-containing protein 30. (298 aa)    
Predicted Functional Partners:
ESPNL
Espin like.
    
 0.769
LRRC20
Leucine-rich repeat-containing protein 20.
  
   
 0.745
ELF1
ETS-related transcription factor Elf-1 isoform X1.
      
 0.694
TWSG1
Twisted gastrulation protein homolog 1 isoform X1.
      
 0.693
ATP1B4
Sodium/potassium-transporting ATPase subunit beta.
   
  
 0.677
ESPN
LOW QUALITY PROTEIN: espin.
    
 0.603
ASB8
Ankyrin repeat and SOCS box protein 8 isoform X1.
    
 0.578
CHRNA1
Nicotinic acetylcholine receptor alpha-1.
   
    0.532
ASB12
Ankyrin repeat and SOCS box protein 12.
   
 0.526
KERA
Keratocan.
  
    0.521
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.