STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRMReceptor-type tyrosine-protein phosphatase mu isoform X1. (1566 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.920
CTNND1
Catenin (cadherin-associated protein), delta 1.
   
  0.903
PTK7
Inactive tyrosine-protein kinase 7.
    
 0.515
ROR1
Inactive tyrosine-protein kinase transmembrane receptor ROR1.
    
 0.484
ROR2
Tyrosine-protein kinase transmembrane receptor ROR2.
    
 0.484
ENSPVIP00000029864
annotation not available
    
 0.484
KIT
Proto-oncogene tyrosine-protein kinase Kit.
    
 0.478
SKAP2
Src kinase-associated phosphoprotein 2 isoform X1.
   
 0.465
LOC110090301
Extracellular matrix protein FRAS1-like.
   
 
 0.460
CSF1R
Macrophage colony-stimulating factor 1 receptor.
    
  0.457
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.