STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRMReceptor-type tyrosine-protein phosphatase mu isoform X1. (1566 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.924
CTNND1
Catenin (cadherin-associated protein), delta 1.
   
 0.910
PTPN6
Tyrosine-protein phosphatase non-receptor type 6 isoform X1.
   
 0.706
LOC110090301
Extracellular matrix protein FRAS1-like.
   
 0.602
EDN3
Endothelin-3.
      
 0.573
DUSP23
Dual specificity phosphatase 23.
    
 
 0.569
PTPN3
Tyrosine-protein phosphatase non-receptor type 3 isoform X1.
    
 
 0.568
PTPRQ
Receptor-type tyrosine-protein phosphatase Q.
    
 0.542
SKAP2
Src kinase-associated phosphoprotein 2 isoform X1.
   
 
 0.542
ENSPVIP00000015452
annotation not available
   
 0.530
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.