STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN13Tyrosine-protein phosphatase non-receptor type 13 isoform X1. (2465 aa)    
Predicted Functional Partners:
PLEKHA2
Pleckstrin homology domain-containing family A member 2-like.
    
 0.944
FAS
Tumor necrosis factor receptor superfamily member 6 isoform X1.
    
 
 0.867
KRT8
Keratin, type II cytoskeletal 8 isoform X1.
    
 
 0.816
LOC110079410
Rap guanine nucleotide exchange factor 6-like isoform X1.
    
   0.784
GAB1
GRB2-associated-binding protein 1 isoform X1.
    
 0.780
APC
Adenomatous polyposis coli protein isoform X1.
   
   0.769
PDLIM4
PDZ and LIM domain protein 1/2/3/4.
    
 0.721
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.683
PLEKHA1
Pleckstrin homology domain-containing family A member 1 isoform X1.
    
  0.665
SLC25A1
Solute carrier family 25 (mitochondrial citrate transporter), member 1.
      
 0.659
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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