Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB12Ras-related protein Rab-12. (189 aa)    
Predicted Functional Partners:
DENND3
DENN domain-containing protein 3 isoform X1.
    
 0.902
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.839
GDI1
Rab GDP dissociation inhibitor alpha.
    
 0.839
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.733
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.733
RHOBTB3
Rho-related BTB domain-containing protein 3.
   
 0.732
RILPL1
Rab interacting lysosomal protein like 1.
    
 0.715
LRRTM1
Leucine-rich repeat transmembrane neuronal protein 1/2.
    
  0.631
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.628
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
   
 0.619
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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