STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80BINO80 complex subunit B. (363 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 0.988
INO80
DNA helicase INO80.
   
 0.987
ACTR5
Actin-related protein 5.
    
 0.987
INO80C
INO80 complex subunit C.
    
 0.985
ACTR8
Actin-related protein 8.
    
 0.984
INO80E
INO80 complex subunit E.
   
 0.978
TFPT
TCF3 fusion partner.
   
 0.977
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.962
RUVBL2
RuvB-like protein 2.
    
 
 0.955
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1.
   
 0.947
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.