STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC31Tetratricopeptide repeat protein 31 isoform X1. (654 aa)    
Predicted Functional Partners:
DQX1
DEAQ-box RNA dependent ATPase 1.
   
 
 0.735
DDX54
ATP-dependent RNA helicase DDX54/DBP10.
   
 0.667
AUP1
Ancient ubiquitous protein 1.
   
  
 0.638
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.595
INTS6L
ATP-dependent RNA helicase DDX26B.
    
 
 0.574
PCGF1
Polycomb group RING finger protein 1.
      
 0.572
WDR11
WD repeat-containing protein 11.
      
 0.564
SF3A3
Splicing factor 3a subunit 3.
   
 
 0.507
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.504
NCBP2
Nuclear cap-binding protein subunit 2.
    
 0.487
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.