STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38BTrimeric intracellular cation channel type B. (332 aa)    
Predicted Functional Partners:
MBTPS2
Membrane-bound transcription factor site-2 protease.
      
 0.695
SEC24D
Protein transport protein Sec24D.
      
 0.658
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
      
 0.643
IFITM5
Interferon-induced transmembrane protein 5.
      
 0.623
SERPINF1
Pigment epithelium-derived factor.
      
 0.617
LRRTM2
Leucine-rich repeat transmembrane neuronal protein 1/2.
    
   0.616
NGLY1
N-glycanase 1.
    
   0.616
CREB3L1
Cyclic AMP-responsive element-binding protein 3-like protein 1.
      
 0.611
SLC25A16
Solute carrier family 25 (mitochondrial carrier protein), member 16.
      
 0.608
SEMA6C
Semaphorin 6C.
      
 0.593
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.