STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC142Coiled-coil domain-containing protein 142. (848 aa)    
Predicted Functional Partners:
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.666
EIF4A1
Eukaryotic initiation factor 4A-I.
   
 
 0.649
EIF4A2
Eukaryotic initiation factor 4A-II.
   
 
 0.649
FBXW11
F-box/WD repeat-containing protein 11 isoform X1.
    
 
 0.640
RECK
Reversion-inducing cysteine-rich protein with Kazal motifs isoform X1.
      
 0.566
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 
 0.562
CLDN18
Claudin-18.
      
 0.554
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
    
 
 0.534
EIF3H
Eukaryotic translation initiation factor 3 subunit H.
    
 
 0.513
THBS1
Thrombospondin-1 isoform X1.
      
 0.505
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.