STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1Histone-lysine N-methyltransferase SMYD1 isoform X1. (473 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase isoform X1.
     
 0.904
TP53
Cellular tumor antigen p53.
   
 0.763
ZNF366
Zinc finger protein 366.
   
 0.708
GAPDH
Glyceraldehyde 3-phosphate dehydrogenase.
   
  
 0.694
THNSL2
Threonine synthase-like 2 isoform X1.
      
 0.679
STRA8
Stimulated by retinoic acid gene 8 protein homolog.
      
 0.679
BMP7
Bone morphogenetic protein 7.
      
 0.679
ZNF367
Zinc finger protein 367.
   
 0.670
PLOD3
Lysyl hydroxylase/galactosyltransferase/glucosyltransferase.
   
  0.668
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  0.668
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.