Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FABP1Fatty acid-binding protein 1, liver. (127 aa)    
Predicted Functional Partners:
APOH
Apolipoprotein H.
   
  
 0.930
FABP2
Fatty acid-binding protein 2, intestinal.
   
 
 0.889
GOT2
Aspartate aminotransferase, mitochondrial isoform X1.
   
 
 0.852
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
   
 
 0.835
COPB2
Coatomer subunit beta.
      
 0.815
UBOX5
U-box domain-containing protein 5.
      
 0.787
ZNF367
Zinc finger protein 367.
      
 0.774
PPARA
Peroxisome proliferator-activated receptor alpha.
    
 0.751
SMYD1
Histone-lysine N-methyltransferase SMYD1 isoform X1.
      
 0.743
GC
Vitamin D-binding protein.
   
  
 0.718
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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