Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USF2Upstream stimulatory factor 2 isoform X1. (415 aa)    
Predicted Functional Partners:
USF1
Upstream stimulatory factor 1 isoform X1.
   
 0.995
MED1
Mediator of RNA polymerase II transcription subunit 1.
     
  0.934
SP1
Transcription factor Sp1 isoform X1.
    
 0.928
EP300
Histone acetyltransferase p300 isoform X1.
    
 0.912
CREBBP
CREB-binding protein isoform X1.
    
 0.815
TAF6L
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 
 0.721
ADAMTS12
A disintegrin and metalloproteinase with thrombospondin motifs 12.
    
 
 0.650
ADAMTS7
A disintegrin and metalloproteinase with thrombospondin motifs 7.
    
 
 0.650
ENSPVIP00000028572
annotation not available
    
 
 0.650
IGLON5
Opioid binding protein/cell adhesion molecule-like.
      
 0.646
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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