Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004608annotation not available (343 aa)    
Predicted Functional Partners:
COP1
E3 ubiquitin-protein ligase RFWD2.
    
 
 0.865
STK40
Serine/threonine-protein kinase 40.
    
   0.860
DET1
DET1 homolog isoform X1.
    
 
 0.748
EWSR1
RNA-binding protein EWS isoform X1.
   
  
 0.565
ETV5
ETS translocation variant 5 isoform X1.
   
   0.535
SLC45A3
Solute carrier family 45 member 3 isoform X1.
      
 0.488
EP300
Histone acetyltransferase p300 isoform X1.
    
 
 0.482
TP53
Cellular tumor antigen p53.
    
 
 0.425
SRF
Serum response factor.
    
 0.411
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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