STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK13Cyclin-dependent kinase 12/13. (410 aa)    
Predicted Functional Partners:
CCNK
Cyclin-K isoform X1.
   
 0.974
LEO1
RNA polymerase-associated protein LEO1.
    
 0.960
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
   
 0.943
SUPT5H
Transcription elongation factor SPT5.
    
 0.930
CCNT1
Cyclin-T1.
   
 0.884
CCNT2
Cyclin-T2 isoform X1.
   
 0.883
CDC73
Parafibromin.
   
 0.857
SUPT6H
Transcription elongation factor SPT6 isoform X1.
   
 0.827
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1.
   
 0.821
CCNH
Cyclin H.
    
 0.820
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.