close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DQX1DEAQ-box RNA dependent ATPase 1. (800 aa)    
Predicted Functional Partners:
TFIP11
Tuftelin-interacting protein 11.
   
 0.974
UTP3
U3 small nucleolar RNA-associated protein 3.
   
 0.972
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.972
ABT1
Activator of basal transcription 1.
   
 0.962
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.961
NOP58
Nucleolar protein 58 isoform X1.
   
 0.960
NAT10
RNA cytidine acetyltransferase.
   
 0.960
BYSL
Essential nuclear protein 1.
   
 0.959
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 0.957
CDC5L
Cell division cycle 5-like protein.
   
 0.956
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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