STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YAE1Yae1 domain-containing protein 1. (215 aa)    
Predicted Functional Partners:
LTO1
LTO1 maturation factor of ABCE1.
   
 
 0.945
ABCE1
ATP-binding cassette, sub-family E, member 1.
    
 
 0.905
MMS19
MMS19 nucleotide excision repair protein homolog.
    
 
 0.718
PRIM2
DNA primase large subunit-like.
      
 0.696
RSAD1
Radical S-adenosyl methionine domain-containing protein 1, mitochondrial.
   
  
 0.696
ELP3
Elongator acetyltransferase complex subunit 3.
   
  
 0.663
PRIM1
DNA primase small subunit isoform X1.
      
 0.647
POLR3F
DNA-directed RNA polymerase III subunit RPC6.
   
  
 0.611
BLZF1
Golgin-45.
      
 0.595
NDOR1
NADPH-dependent diflavin oxidoreductase 1.
      
 0.566
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.