STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUP1Ancient ubiquitous protein 1. (513 aa)    
Predicted Functional Partners:
SEL1L
Protein sel-1 homolog 1.
   
 
 0.976
UBE2G2
Ubiquitin-conjugating enzyme E2 G2.
    
 
 0.967
UBE2J1
Ubiquitin-conjugating enzyme E2 J1 isoform X1.
   
 
 0.865
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 
 0.853
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X1.
    
 
 0.840
AMFR
Autocrine motility factor receptor.
    
 
 0.840
FAF2
FAS-associated factor 2 isoform X1.
    
 
 0.828
GPAT4
Glycerol-3-phosphate O-acyltransferase 3/4.
    
 
 0.827
SEL1L2
Protein sel-1 homolog 2.
   
 
 0.796
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
    
 
 0.777
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.