Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004635NACHT, LRR and PYD domains-containing protein 12-like. (634 aa)    
Predicted Functional Partners:
LOC110085504
Receptor-interacting serine/threonine-protein kinase 2-like isoform X1.
   
 0.572
RIPK2
Receptor-interacting serine/threonine-protein kinase 2.
   
 0.572
TAB1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1.
   
 0.533
WDR90
WD repeat-containing protein 90-like.
   
 0.524
RPS27A
Ribosomal protein S27a.
    
  0.501
ENSPVIP00000006312
annotation not available
    
   0.474
NME8
Thioredoxin domain-containing protein 3.
    
   0.474
ENSPVIP00000006316
annotation not available
    
   0.474
RSPH4A
Radial spoke head protein 4 homolog A-like.
   
 
 0.444
USP14
Ubiquitin carboxyl-terminal hydrolase 14 isoform X1.
    
 0.437
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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