Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000004642annotation not available (85 aa)    
Predicted Functional Partners:
SUPT5H
Transcription elongation factor SPT5.
    
 
 0.868
LOC110085145
DNA-directed RNA polymerase II subunit RPB11-a.
   
   0.852
POLR2I
DNA-directed RNA polymerase II subunit RPB9.
   
 
 0.840
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
   0.830
UVSSA
UV-stimulated scaffold protein A.
    
 
 0.792
POLR2E
RNA polymerase II subunit E.
   
   0.790
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1.
    
   0.783
LEO1
RNA polymerase-associated protein LEO1.
   
 
 0.766
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
   
 
 0.761
IWS1
Protein IWS1 homolog isoform X1.
    
 
 0.755
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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