STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP4R1Serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1. (963 aa)    
Predicted Functional Partners:
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
   
 0.951
CCDC6
Coiled-coil domain-containing protein 6.
    
 
 0.895
C1S
Complement component 1, s subcomponent.
    
   0.854
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
   
 0.756
PPP2CB
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
   
 0.756
NDEL1
Nuclear distribution protein nudE-like 1 isoform X1.
   
 
 0.714
PPME1
Protein phosphatase methylesterase 1.
    
 0.692
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
    
 0.673
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 0.673
PTPA
Serine/threonine-protein phosphatase 2A activator isoform X1.
   
 
 0.616
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.