STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APCDD1Protein APCDD1. (515 aa)    
Predicted Functional Partners:
LRP5
Low density lipoprotein receptor-related protein 5/6.
    
 0.511
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.491
GLMN
Glomulin.
   
  0.430
UTP20
Small subunit processome component 20 homolog isoform X1.
   
  0.430
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 0.428
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
  0.425
NOC4L
U3 small nucleolar RNA-associated protein 19.
    
  0.423
KRR1
KRR1 small subunit processome component homolog isoform X1.
    
  0.423
DCAF13
DDB1- and CUL4-associated factor 13.
    
  0.423
RPS7
40S ribosomal protein S7 isoform X1.
    
  0.423
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.