STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4FSemaphorin-4F. (735 aa)    
Predicted Functional Partners:
MET
Hepatocyte growth factor receptor isoform X1.
    
 0.654
MST1R
Macrophage stimulating 1 receptor.
    
 0.654
NRP1
Neuropilin-1 isoform X1.
    
 0.561
PLXNC1
Plexin-C1 isoform X1.
    
 0.559
PLXND1
Plexin-D1.
    
0.546
SEMA6C
Semaphorin 6C.
      
0.497
SEMA6D
Semaphorin-6D isoform X1.
      
0.497
FARP1
FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1.
     
 0.449
PLXNB1
Plexin-B1.
    
0.441
PLXNB2
Plexin-B2.
    
0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.